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Two-pore channel

two pore segment channel 1
Identifiers
SymbolTPCN1
IUPHAR392
NCBI gene53373
HGNC18182
OMIM609666
RefSeqNM_017901
UniProtQ9ULQ1
Other data
LocusChr. 12 q24.21
Search for
StructuresSwiss-model
DomainsInterPro
two pore segment channel 2
Identifiers
SymbolTPCN2
IUPHAR393
NCBI gene219931
HGNC20820
RefSeqNM_139075
UniProtQ8NHX9
Other data
LocusChr. 11 q13.1
Search for
StructuresSwiss-model
DomainsInterPro

Two-pore channels (TPCs) are eukaryotic intracellular voltage-gated and ligand gated cation selective ion channels.[1] There are two known paralogs in the human genome, TPC1s and TPC2s.[2] In humans, TPC1s are sodium selective and TPC2s conduct sodium ions, calcium ions and possibly hydrogen ions. Plant TPC1s are non-selective channels. Expression of TPCs are found in both plant vacuoles and animal acidic organelles.[3] These organelles consist of endosomes and lysosomes.[3] TPCs are formed from two transmembrane non-equivalent tandem Shaker-like, pore-forming subunits, dimerized to form quasi-tetramers. Quasi-tetramers appear very similar to tetramers, but are not quite the same.[1][3] Some key roles of TPCs include calcium dependent responses in muscle contraction(s), hormone secretion, fertilization, and differentiation.[citation needed] Disorders linked to TPCs include membrane trafficking, Parkinson's disease, Ebola, and fatty liver.[4][5][6][7]

As implied by their name, TPC channels possess two pores and were named for their two Shaker-like repeats, which each have a pore domain.[1][8][9][10][11] This contrasts with two-pore-domain potassium channels, which confusingly have only one pore and were named for the fact that each subunit has two P (pore) domains in its primary sequence.[12][13]

  1. ^ a b c Kintzer AF, Stroud RM (March 2016). "Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana". Nature. 531 (7593): 258–62. Bibcode:2016Natur.531..258K. doi:10.1038/nature17194. PMC 4863712. PMID 26961658. Other than Ca2+ and Na+ channels that are formed by four intramolecular repeats, together forming the tetrameric channel's pore, the new channel had just two Shaker-like repeats, each of which was equipped with one pore domain. Because of this unusual topology, this channel, present in animals as well as plants, was named Two Pore Channel1 (TPC1).
  2. ^ Yu FH, Catterall WA (October 2004). "The VGL-chanome: a protein superfamily specialized for electrical signaling and ionic homeostasis". Science's STKE. 2004 (253): re15. doi:10.1126/stke.2532004re15. PMID 15467096. S2CID 19506706.
  3. ^ a b c Patel S (July 2015). "Function and dysfunction of two-pore channels". Science Signaling. 8 (384): re7. doi:10.1126/scisignal.aab3314. PMID 26152696. S2CID 27822899.
  4. ^ Marchant JS, Patel S (June 2015). "Two-pore channels at the intersection of endolysosomal membrane traffic". Biochemical Society Transactions. 43 (3): 434–41. doi:10.1042/BST20140303. PMC 4730950. PMID 26009187.
  5. ^ Falasca L, Agrati C, Petrosillo N, Di Caro A, Capobianchi MR, Ippolito G, Piacentini M (August 2015). "Molecular mechanisms of Ebola virus pathogenesis: focus on cell death". Cell Death and Differentiation. 22 (8): 1250–9. doi:10.1038/cdd.2015.67. PMC 4495366. PMID 26024394.
  6. ^ Sakurai Y, Kolokoltsov AA, Chen CC, Tidwell MW, Bauta WE, Klugbauer N, Grimm C, Wahl-Schott C, Biel M, Davey RA (February 2015). "Ebola virus. Two-pore channels control Ebola virus host cell entry and are drug targets for disease treatment". Science. 347 (6225): 995–8. doi:10.1126/science.1258758. PMC 4550587. PMID 25722412.
  7. ^ Grimm C, Holdt LM, Chen CC, Hassan S, Müller C, Jörs S, Cuny H, Kissing S, Schröder B, Butz E, Northoff B, Castonguay J, Luber CA, Moser M, Spahn S, Lüllmann-Rauch R, Fendel C, Klugbauer N, Griesbeck O, Haas A, Mann M, Bracher F, Teupser D, Saftig P, Biel M, Wahl-Schott C (August 2014). "High susceptibility to fatty liver disease in two-pore channel 2-deficient mice". Nature Communications. 5 (2): 4699. Bibcode:2014NatCo...5.4699G. CiteSeerX 10.1.1.659.8695. doi:10.1038/ncomms5699. PMID 25144390. S2CID 9153781.
  8. ^ Spalding EP, Harper JF (December 2011). "The ins and outs of cellular Ca(2+) transport". Current Opinion in Plant Biology. 14 (6): 715–20. doi:10.1016/j.pbi.2011.08.001. PMC 3230696. PMID 21865080. The best candidate for a vacuolar Ca2+ release channel is TPC1, a homolog of a mammalian voltage-gated Ca2+ channel that possesses two pores and twelve membrane spans.
  9. ^ Brown BM, Nguyen HM, Wulff H (2019-01-30). "Recent advances in our understanding of the structure and function of more unusual cation channels". F1000Research. 8: 123. doi:10.12688/f1000research.17163.1. PMC 6354322. PMID 30755796. Organellar two-pore channels (TPCs) are an interesting type of channel that, as the name suggests, has two pores.
  10. ^ Jammes F, Hu HC, Villiers F, Bouten R, Kwak JM (November 2011). "Calcium-permeable channels in plant cells". The FEBS Journal. 278 (22): 4262–76. doi:10.1111/j.1742-4658.2011.08369.x. PMID 21955583. S2CID 205884593. The Arabidopsis two‐pore channel (AtTPC1) has been predicted to have 12 transmembrane helices and two pores (red lines).
  11. ^ Robert Hooper (September 2011). Molecular characterisation of NAADP-gated two-pore channels (PDF) (Thesis). It is believed that TPCs, with their two pores, dimerise to form a functional channel.
  12. ^ "Two P domain potassium channels". Guide to Pharmacology. Retrieved 2019-05-28.
  13. ^ Rang, HP (2003). Pharmacology (8 ed.). Edinburgh: Churchill Livingstone. p. 59. ISBN 978-0-443-07145-4.

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