Template:Infobox protein family

Available protein structures:
Pfam	structures / ECOD
PDB	RCSB PDB; PDBe; PDBj
PDBsum	structure summary

Ligand-binding domain (LBD)
Ligand-binding domain (LBD)
	RORγ (PDB: 3L0L)
Identifiers
Symbol	Hormone_recep
Pfam	PF00104
ECOD	188.1.1.1
InterPro	IPR000536
SMART	SM00430
CATH	1lbd
SCOP2	1lbd / SCOPe / SUPFAM
CDD	cd06157
Pfam
Available protein structures:
Pfam	structures / ECOD
PDB	RCSB PDB; PDBe; PDBj
PDBsum	structure summary

Infobox protein family
Infobox protein family
Identifiers
Symbol	?

Template documentation[view] [edit] [history] [purge]

This template is used on approximately 2,100 pages and changes may be widely noticed. Test changes in the template's /sandbox or /testcases subpages, or in your own user subpage. Consider discussing changes on the talk page before implementing them.

Preview message: Transclusion count updated automatically (see documentation).

This template adds an automatically generated short description. If the automatic short description is not optimal, replace it by adding {{Short description}} at the top of the article.

This is template for a protein family/domain as defined in biological databases such as Pfam.

Usage

To use this template, copy the following text and paste it at the top of your article. Fill in as many fields as possible, but don't worry if some information is missing.

{{Infobox protein family
| class = <!-- to save space: mw-collapsible mw-collapsed -->
| Symbol = 
| Name = 
| image = 
| caption = 
| Pfam = 
| Pfam_clan = 
| ECOD =
| InterPro = 
| SMART = 
| PROSITE = 
| MEROPS =
| CATH =
| SCOP = 
| TCDB = 
| OPM family = <!-- actually the OPM superfamily. Write ONLY WHEN the protein family has an exact "superfamily" match! -->
| OPM protein = 
| CAZy = 
| CDD =
| Membranome superfamily = <!-- same as above: only when exact match. -->
| Membranome family =
}}

Examples

The following filled in Pfam infobox template produces the information box to the right.

{{Infobox protein family
| Symbol = Hormone_recep
| class = collapsible
| Name = Ligand-binding domain (LBD)
| image = RORC_3L0L.png
| caption = [[RAR-related orphan receptor gamma|RORγ]] ({{PDB|3L0L}})
| Pfam = PF00104
| ECOD = 188.1.1.1
| InterPro = IPR000536
| SMART = SM00430
| PROSITE = 
| SCOP = 1lbd
| CATH = 1lbd
| TCDB =
| OPM family =
| OPM protein =
| CDD = cd06157
}}

Maintenance

Category:Protein pages needing a picture

TemplateData

This is the TemplateData for this template used by TemplateWizard, VisualEditor and other tools. See a monthly parameter usage report for Template:Infobox protein family in articles based on its TemplateData.

TemplateData for Infobox protein family

This is template for a protein family/domain as defined in biological databases such as Pfam.

Template parameters[Edit template data]
Parameter		Description	Type	Status
Symbol	`Symbol`	no description	Line	optional
Name	`Name`	no description	Line	optional
Image	`image`	fill in "NONE" if not needed to suppress the tracking category	File	optional
Width	`width`	Width for image	String	optional
Caption	`caption`	Caption for image	String	optional
InterPro family identifier	`InterPro`	no description	Unknown	optional
Pfam family identifier	`Pfam`	Auto-links to Pfam family record	Line	optional
Pfam clan identifier	`Pfam_clan`	Auto-links to Pfam clan record; a clan is a group of related families (~superfamily).	Line	optional
ECOD identifier	`ECOD`	Auto-links to the ECOD database	Line	optional
Interpro identifier	`Interpro`	Auto-links to an Interpro entry	Line	optional
SMART accession number	`SMART`	Auto-links to a domain entry in the Simple Modular Architecture Research Tool	Line	optional
PROSITE record identifier	`PROSITE`	Auto-links to a PROSITE record search	Line	optional
MEROPS record identifier	`MEROPS`	Auto-links to a MEROPS record (MEROPS is scoped to peptidases and their inhibitors)	Line	optional
SCOP (domain/PDB accession number)	`SCOP`	Given a PDB accession number or SCOP domain name, auto-links to a SCOP and a SUPFAMpage.	Line	optional
SCOP2 override	`SCOP2`	SCOP and SCOP2 use different domain nomenclature. Use this value if a domain is specified for SCOP. Example 8029676	Unknown	optional
CATH (domain/PDB accession number)	`CATH`	Given a CATH domain ID or a PDB accession number, auto-links to CATH (Classification of Protein Structural Domains).	Line	optional
TCDB identifier	`TCDB`	Auto-links to an identifier search in the Transporter Classification Database	Line	optional
OPM superfamily identifier	`OPM family`	Auto-links to a superfamily record in the database of Orientations of Proteins in Membranes.	Line	optional
OPM protein identifier	`OPM protein`	Value will typically be a PDB identifier; auto-links to a protein record in the database of Orientations of Proteins in Membranes	Line	optional
CAZy family identifier	`CAZy`	Auto-links to a family description page in the database of Carbohydrate-Active enZYmes.	Line	optional
CDD uid	`CDD`	Auto-links to a record in the Conserved Domain Database	Line	optional
align	`align`	no description	Unknown	optional
image_size	`image_size`	no description	Unknown	optional
alt	`alt`	no description	Unknown	optional
Membranome superfamily	`Membranome superfamily`	no description	Unknown	optional
Membranome family	`Membranome family`	no description	Unknown	optional
class	`class`	infobox class Example mw-collapsible mw-collapsed	Unknown	optional
below	`below`	footnotes	Unknown	optional
PDB	`PDB`	PDB examples. Only use if all of: no image is available, no CATH/SCOP examples, InterPro or PDB search fails.	Content	deprecated

The above documentation is transcluded from Template:Infobox protein family/doc.
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